public class AnnotateCSVCommand extends JannovarAnnotationCommand
| Constructor and Description |
|---|
AnnotateCSVCommand(String[] argv,
net.sourceforge.argparse4j.inf.Namespace args) |
| Modifier and Type | Method and Description |
|---|---|
void |
run()
This function will simply annotate a csv file wehere positions are set
|
public AnnotateCSVCommand(String[] argv, net.sourceforge.argparse4j.inf.Namespace args) throws CommandLineParsingException
argv - args - CommandLineParsingExceptionpublic void run()
throws JannovarException
run in class JannovarCommandoptions - configuration for the commandAnnotationException - on problems in the annotation processJannovarException - on problems executing the command.Copyright © 2016. All rights reserved.