public class AnnotatePositionCommand extends JannovarAnnotationCommand
| Constructor and Description |
|---|
AnnotatePositionCommand(String[] argv,
net.sourceforge.argparse4j.inf.Namespace args) |
| Modifier and Type | Method and Description |
|---|---|
void |
run()
This function will simply annotate given chromosomal position with HGVS compliant output.
|
public AnnotatePositionCommand(String[] argv, net.sourceforge.argparse4j.inf.Namespace args) throws CommandLineParsingException
CommandLineParsingExceptionpublic void run()
throws JannovarException
run in class JannovarCommandoptions - configuration for the commandAnnotationException - on problems in the annotation processJannovarException - on problems executing the command.Copyright © 2016. All rights reserved.