- Jannovar - Class in de.charite.compbio.jannovar
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This is the driver class for a program called Jannovar.
- Jannovar() - Constructor for class de.charite.compbio.jannovar.Jannovar
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- JannovarAnnotateCSVOptions - Class in de.charite.compbio.jannovar.cmd.annotate_csv
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Options for the annotate-pos comman
- JannovarAnnotateCSVOptions() - Constructor for class de.charite.compbio.jannovar.cmd.annotate_csv.JannovarAnnotateCSVOptions
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- JannovarAnnotatePosOptions - Class in de.charite.compbio.jannovar.cmd.annotate_pos
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Options for the annotate-pos comman
- JannovarAnnotatePosOptions() - Constructor for class de.charite.compbio.jannovar.cmd.annotate_pos.JannovarAnnotatePosOptions
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- JannovarAnnotateVCFOptions - Class in de.charite.compbio.jannovar.cmd.annotate_vcf
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Options for annotating VCF files
- JannovarAnnotateVCFOptions() - Constructor for class de.charite.compbio.jannovar.cmd.annotate_vcf.JannovarAnnotateVCFOptions
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- JannovarAnnotationCommand - Class in de.charite.compbio.jannovar.cmd
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Base class for commands needing annotation data.
- JannovarAnnotationCommand() - Constructor for class de.charite.compbio.jannovar.cmd.JannovarAnnotationCommand
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- JannovarAnnotationOptions - Class in de.charite.compbio.jannovar.cmd
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Configuration for the annotation commands
- JannovarAnnotationOptions() - Constructor for class de.charite.compbio.jannovar.cmd.JannovarAnnotationOptions
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- JannovarBaseOptions - Class in de.charite.compbio.jannovar.cmd
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Base option class for global Jannovar options
- JannovarBaseOptions() - Constructor for class de.charite.compbio.jannovar.cmd.JannovarBaseOptions
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- JannovarCommand - Class in de.charite.compbio.jannovar.cmd
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Super class for all commands, i.e.
- JannovarCommand() - Constructor for class de.charite.compbio.jannovar.cmd.JannovarCommand
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- JannovarDBListOptions - Class in de.charite.compbio.jannovar.cmd.db_list
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Configuration for the db-list command
- JannovarDBListOptions() - Constructor for class de.charite.compbio.jannovar.cmd.db_list.JannovarDBListOptions
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- JannovarDBOptions - Class in de.charite.compbio.jannovar.cmd
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Configuration for database-related commands in Jannovar
- JannovarDBOptions() - Constructor for class de.charite.compbio.jannovar.cmd.JannovarDBOptions
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- JannovarDownloadOptions - Class in de.charite.compbio.jannovar.cmd.download
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Configuration for the download command
- JannovarDownloadOptions() - Constructor for class de.charite.compbio.jannovar.cmd.download.JannovarDownloadOptions
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